Sample Data

Sample ID:	SAMEA10644977
Run ID:	ERR7287988
Sample Type:	Metagenomic (ZymoBIOMICS HMW DNA Standard)
Barcode:	XBD

Kraken2 Results

Kraken2 Assignment rates per taxonomic rank

Figure 1a: Number of reads assigned by Kraken2 at each taxonomic rank, reported at the most specific rank it was possible to assign.

Kraken2 Species abundance estimates

Figure 1b: Kraken2 species abundance estimates, reported for the top 50 most abundant species (all remaining reads are grouped under 'Other'). Reads assigned at the subspecies level are not shown.

Kraken2 Species abundance re-estimates (Bracken)

Figure 1c: Re-estimation of Kraken2 species abundance estimates using Bracken, reported as the number of reads assigned at species level (including subspecies; excluding unassigned).

Centrifuger Results

Centrifuger assignment rates per taxonomic rank

Figure 2a: Number of reads assigned by Centrifuger at each taxonomic rank, reported at the most specific rank it was possible to assign.

Centrifuger species abundance estimates

Figure 2b: Centrifuger species abundance estimates, reported for the top 50 most abundant species (all remaining reads are grouped under 'Other'). Reads assigned at the subspecies level are not shown.

Centrifuger species abundance re-estimates (Bracken)

Figure 2c: Re-estimation of Centrifuger abundance estimates using Bracken, reported as the number of reads assigned at species level (including subspecies; excluding unassigned).

Sylph Results

Sylph species abundance estimates

Figure 3: Sylph species abundance estimates, reported for the top 50 most abundant species (all remaining reads are grouped under 'Other').

Taxonomic Abundance

Not a validated test. For research use only